Package: leidenAlg 1.1.8

Evan Biederstedt

leidenAlg: Implements the Leiden Algorithm via an R Interface

An R interface to the Leiden algorithm, an iterative community detection algorithm on networks. The algorithm is designed to converge to a partition in which all subsets of all communities are locally optimally assigned, yielding communities guaranteed to be connected. The implementation proves to be fast, scales well, and can be run on graphs of millions of nodes (as long as they can fit in memory). The original implementation was constructed as a python interface "leidenalg" found here: <https://github.com/vtraag/leidenalg>. The algorithm was originally described in Traag, V.A., Waltman, L. & van Eck, N.J. "From Louvain to Leiden: guaranteeing well-connected communities". Sci Rep 9, 5233 (2019) <doi:10.1038/s41598-019-41695-z>.

Authors:Peter Kharchenko [aut], Viktor Petukhov [aut], Yichen Wang [aut], V.A. Traag [ctb], Gábor Csárdi [ctb], Tamás Nepusz [ctb], Minh Van Nguyen [ctb], Evan Biederstedt [cre, aut]

leidenAlg_1.1.8.tar.gz
leidenAlg_1.1.8.zip(r-4.7-x86_64)leidenAlg_1.1.8.zip(r-4.7-arm64)leidenAlg_1.1.8.zip(r-4.6-x86_64)leidenAlg_1.1.8.zip(r-4.6-arm64)leidenAlg_1.1.8.zip(r-4.5-x86_64)
leidenAlg_1.1.8.tgz(r-4.6-x86_64)leidenAlg_1.1.8.tgz(r-4.6-arm64)leidenAlg_1.1.8.tgz(r-4.5-x86_64)leidenAlg_1.1.8.tgz(r-4.5-arm64)
leidenAlg_1.1.8.tar.gz(r-4.7-arm64)leidenAlg_1.1.8.tar.gz(r-4.7-x86_64)leidenAlg_1.1.8.tar.gz(r-4.6-arm64)leidenAlg_1.1.8.tar.gz(r-4.6-x86_64)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
leidenAlg/json (API)

# Install 'leidenAlg' in R:
install.packages('leidenAlg', repos = c('https://kharchenkolab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kharchenkolab/leidenalg/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

cpp

7.08 score 13 stars 7 packages 66 scripts 4.4k downloads 8 exports 44 dependencies

Last updated from:665cfef3c6. Checks:14 OK, 1 FAIL. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK229
linux-devel-x86_64OK267
source / vignettesOK276
linux-release-arm64OK227
linux-release-x86_64OK251
macos-release-arm64OK238
macos-release-x86_64OK343
macos-oldrel-arm64OK164
macos-oldrel-x86_64OK711
windows-devel-arm64OK394
windows-devel-x86_64OK259
windows-release-arm64OK541
windows-release-x86_64OK312
windows-oldrel-x86_64OK299
wasm-releaseFAIL192

Exports:as.dendrogram.fakeCommunitiesfind_partitionfind_partition_rcppfind_partition_with_repfind_partition_with_rep_rcppleiden.communitymembership.fakeCommunitiesrleiden.community

Dependencies:BHclicpp11dplyrdqrngfarverFNNgenericsggplot2ggrepelgluegtableigraphirlbaisobandlabelinglatticelifecyclemagrittrMatrixpbmcapplypillarpkgconfigpROCR6RColorBrewerRcppRcppAnnoyRcppArmadilloRcppEigenRcppProgressrlangRSpectraS7scalessccoresitmotibbletidyselectutf8uwotvctrsviridisLitewithr