Package: leidenAlg 1.1.4

Evan Biederstedt

leidenAlg: Implements the Leiden Algorithm via an R Interface

An R interface to the Leiden algorithm, an iterative community detection algorithm on networks. The algorithm is designed to converge to a partition in which all subsets of all communities are locally optimally assigned, yielding communities guaranteed to be connected. The implementation proves to be fast, scales well, and can be run on graphs of millions of nodes (as long as they can fit in memory). The original implementation was constructed as a python interface "leidenalg" found here: <https://github.com/vtraag/leidenalg>. The algorithm was originally described in Traag, V.A., Waltman, L. & van Eck, N.J. "From Louvain to Leiden: guaranteeing well-connected communities". Sci Rep 9, 5233 (2019) <doi:10.1038/s41598-019-41695-z>.

Authors:Peter Kharchenko [aut], Viktor Petukhov [aut], Yichen Wang [aut], V.A. Traag [ctb], Gábor Csárdi [ctb], Tamás Nepusz [ctb], Minh Van Nguyen [ctb], Evan Biederstedt [cre, aut]

leidenAlg_1.1.4.tar.gz
leidenAlg_1.1.4.zip(r-4.5)leidenAlg_1.1.4.zip(r-4.4)leidenAlg_1.1.4.zip(r-4.3)
leidenAlg_1.1.4.tgz(r-4.4-x86_64)leidenAlg_1.1.4.tgz(r-4.4-arm64)leidenAlg_1.1.4.tgz(r-4.3-x86_64)leidenAlg_1.1.4.tgz(r-4.3-arm64)
leidenAlg_1.1.4.tar.gz(r-4.5-noble)leidenAlg_1.1.4.tar.gz(r-4.4-noble)
leidenAlg.pdf |leidenAlg.html
leidenAlg/json (API)

# Install 'leidenAlg' in R:
install.packages('leidenAlg', repos = c('https://kharchenkolab.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/kharchenkolab/leidenalg/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

5.82 score 9 stars 5 packages 27 scripts 1.8k downloads 8 exports 50 dependencies

Last updated 20 days agofrom:d81e6097fd. Checks:OK: 1 NOTE: 4 WARNING: 4. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 17 2024
R-4.5-win-x86_64NOTEOct 17 2024
R-4.5-linux-x86_64NOTEOct 17 2024
R-4.4-win-x86_64NOTEOct 17 2024
R-4.4-mac-x86_64WARNINGOct 17 2024
R-4.4-mac-aarch64WARNINGOct 17 2024
R-4.3-win-x86_64NOTEOct 17 2024
R-4.3-mac-x86_64WARNINGOct 17 2024
R-4.3-mac-aarch64WARNINGOct 17 2024

Exports:as.dendrogram.fakeCommunitiesfind_partitionfind_partition_rcppfind_partition_with_repfind_partition_with_rep_rcppleiden.communitymembership.fakeCommunitiesrleiden.community

Dependencies:BHclicolorspacecpp11dplyrdqrngfansifarverFNNgenericsggplot2ggrepelgluegtableigraphirlbaisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepbmcapplypillarpkgconfigplyrpROCR6RColorBrewerRcppRcppAnnoyRcppArmadilloRcppEigenRcppProgressrlangRSpectrascalessccoresitmotibbletidyselectutf8uwotvctrsviridisLitewithr