Package: leidenAlg 1.1.8

Evan Biederstedt

leidenAlg: Implements the Leiden Algorithm via an R Interface

An R interface to the Leiden algorithm, an iterative community detection algorithm on networks. The algorithm is designed to converge to a partition in which all subsets of all communities are locally optimally assigned, yielding communities guaranteed to be connected. The implementation proves to be fast, scales well, and can be run on graphs of millions of nodes (as long as they can fit in memory). The original implementation was constructed as a python interface "leidenalg" found here: <https://github.com/vtraag/leidenalg>. The algorithm was originally described in Traag, V.A., Waltman, L. & van Eck, N.J. "From Louvain to Leiden: guaranteeing well-connected communities". Sci Rep 9, 5233 (2019) <doi:10.1038/s41598-019-41695-z>.

Authors:Peter Kharchenko [aut], Viktor Petukhov [aut], Yichen Wang [aut], V.A. Traag [ctb], Gábor Csárdi [ctb], Tamás Nepusz [ctb], Minh Van Nguyen [ctb], Evan Biederstedt [cre, aut]

leidenAlg_1.1.8.tar.gz
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leidenAlg_1.1.8.tgz(r-4.6-x86_64)leidenAlg_1.1.8.tgz(r-4.6-arm64)leidenAlg_1.1.8.tgz(r-4.5-x86_64)leidenAlg_1.1.8.tgz(r-4.5-arm64)
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manual.pdf |manual.html
card.svg |card.png
leidenAlg/json (API)

# Install 'leidenAlg' in R:
install.packages('leidenAlg', repos = c('https://kharchenkolab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kharchenkolab/leidenalg/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

cpp

6.83 score 12 stars 6 packages 57 scripts 3.6k downloads 8 exports 44 dependencies

Last updated from:665cfef3c6. Checks:12 OK, 1 FAIL. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK273
linux-devel-x86_64OK272
source / vignettesOK296
linux-release-arm64OK299
linux-release-x86_64OK269
macos-release-arm64OK181
macos-release-x86_64OK413
macos-oldrel-arm64OK155
macos-oldrel-x86_64OK379
windows-develOK684
windows-releaseOK558
windows-oldrelOK660
wasm-releaseFAIL241

Exports:as.dendrogram.fakeCommunitiesfind_partitionfind_partition_rcppfind_partition_with_repfind_partition_with_rep_rcppleiden.communitymembership.fakeCommunitiesrleiden.community

Dependencies:BHclicpp11dplyrdqrngfarverFNNgenericsggplot2ggrepelgluegtableigraphirlbaisobandlabelinglatticelifecyclemagrittrMatrixpbmcapplypillarpkgconfigpROCR6RColorBrewerRcppRcppAnnoyRcppArmadilloRcppEigenRcppProgressrlangRSpectraS7scalessccoresitmotibbletidyselectutf8uwotvctrsviridisLitewithr