Package: leidenAlg 1.1.4

Evan Biederstedt

leidenAlg: Implements the Leiden Algorithm via an R Interface

An R interface to the Leiden algorithm, an iterative community detection algorithm on networks. The algorithm is designed to converge to a partition in which all subsets of all communities are locally optimally assigned, yielding communities guaranteed to be connected. The implementation proves to be fast, scales well, and can be run on graphs of millions of nodes (as long as they can fit in memory). The original implementation was constructed as a python interface "leidenalg" found here: <https://github.com/vtraag/leidenalg>. The algorithm was originally described in Traag, V.A., Waltman, L. & van Eck, N.J. "From Louvain to Leiden: guaranteeing well-connected communities". Sci Rep 9, 5233 (2019) <doi:10.1038/s41598-019-41695-z>.

Authors:Peter Kharchenko [aut], Viktor Petukhov [aut], Yichen Wang [aut], V.A. Traag [ctb], Gábor Csárdi [ctb], Tamás Nepusz [ctb], Minh Van Nguyen [ctb], Evan Biederstedt [cre, aut]

leidenAlg_1.1.4.tar.gz
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leidenAlg.pdf |leidenAlg.html
leidenAlg/json (API)

# Install 'leidenAlg' in R:
install.packages('leidenAlg', repos = c('https://kharchenkolab.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/kharchenkolab/leidenalg/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

fortrancpp

5.81 score 9 stars 5 packages 28 scripts 1.7k downloads 8 exports 50 dependencies

Last updated 3 months agofrom:d81e6097fd. Checks:3 OK, 4 WARNING, 2 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 15 2025
R-4.5-win-x86_64OKJan 15 2025
R-4.5-linux-x86_64OKJan 15 2025
R-4.4-win-x86_64NOTEJan 15 2025
R-4.4-mac-x86_64WARNINGJan 15 2025
R-4.4-mac-aarch64WARNINGJan 15 2025
R-4.3-win-x86_64NOTEJan 15 2025
R-4.3-mac-x86_64WARNINGJan 15 2025
R-4.3-mac-aarch64WARNINGJan 15 2025

Exports:as.dendrogram.fakeCommunitiesfind_partitionfind_partition_rcppfind_partition_with_repfind_partition_with_rep_rcppleiden.communitymembership.fakeCommunitiesrleiden.community

Dependencies:BHclicolorspacecpp11dplyrdqrngfansifarverFNNgenericsggplot2ggrepelgluegtableigraphirlbaisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepbmcapplypillarpkgconfigplyrpROCR6RColorBrewerRcppRcppAnnoyRcppArmadilloRcppEigenRcppProgressrlangRSpectrascalessccoresitmotibbletidyselectutf8uwotvctrsviridisLitewithr